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Re: carbondata-0.2 load data failed in yarn molde

Posted by Liang Chen on Dec 09, 2016; 3:48am
URL: http://apache-carbondata-dev-mailing-list-archive.168.s1.nabble.com/carbondata-0-2-load-data-failed-in-yarn-molde-tp3908p3973.html

Hi

Have you solved this issue after applying new configurations?

Regards
Liang
geda wrote
hello:
i test  data in spark locak model ,then load data inpath to table ,works well.
but when i use yarn-client modle,  with 1w rows , size :940k ,but error happend ,there is no lock find in  tmp dir ,i don't know how to debug,help.thanks.
spark1.6 hadoop 2.7|2.6 carbondata 0.2
local mode: run ok
$SPARK_HOME/bin/spark-shell --master local[4]  --jars /usr/local/spark/lib/carbondata_2.10-0.2.0-incubating-shade-hadoop2.7.1.jar


yarn command : run bad
 $SPARK_HOME/bin/spark-shell --verbose  --master yarn-client --driver-memory 1G --driver-cores 1   --executor-memory 4G --num-executors 5 --executor-cores 1 --conf "spark.executor.extraJavaOptions=-XX:NewRatio=2 -XX:PermSize=512m -XX:MaxPermSize=512m -XX:SurvivorRatio=6  -verbose:gc -XX:-PrintGCDetails -XX:+PrintGCTimeStamps " --conf "spark.driver.extraJavaOptions=-XX:MaxPermSize=512m -XX:PermSize=512m"  --conf spark.yarn.driver.memoryOverhead=1024 --conf spark.yarn.executor.memoryOverhead=3096    --jars /usr/local/spark/lib/carbondata_2.10-0.2.0-incubating-shade-hadoop2.7.1.jar

import java.io._
import org.apache.hadoop.hive.conf.HiveConf
import org.apache.spark.sql.CarbonContext
val storePath = "hdfs://test:8020/usr/carbondata/store"
val cc = new CarbonContext(sc, storePath)
cc.setConf(HiveConf.ConfVars.HIVECHECKFILEFORMAT.varname, "false")
cc.setConf("carbon.kettle.home","/usr/local/spark/carbondata/carbonplugins")
cc.sql("CREATE TABLE `LINEORDER3` (   LO_ORDERKEY       bigint,   LO_LINENUMBER     int,   LO_CUSTKEY        bigint,   LO_PARTKEY        bigint,   LO_SUPPKEY        bigint,   LO_ORDERDATE      int,   LO_ORDERPRIOTITY  string,   LO_SHIPPRIOTITY   int,   LO_QUANTITY       int,   LO_EXTENDEDPRICE  int,   LO_ORDTOTALPRICE  int,   LO_DISCOUNT       int,   LO_REVENUE        int,   LO_SUPPLYCOST     int,   LO_TAX            int,   LO_COMMITDATE     int,   LO_SHIPMODE       string ) STORED BY 'carbondata'")
cc.sql(s"load data local inpath 'hdfs://test:8020/tmp/lineorder_1w.tbl'  into table lineorder3 options('DELIMITER'='|', 'FILEHEADER'='LO_ORDERKEY, LO_LINENUMBER, LO_CUSTKEY, LO_PARTKEY , LO_SUPPKEY , LO_ORDERDATE ,   LO_ORDERPRIOTITY ,   LO_SHIPPRIOTITY , LO_QUANTITY ,LO_EXTENDEDPRICE , LO_ORDTOTALPRICE ,LO_DISCOUNT , LO_REVENUE  ,   LO_SUPPLYCOST,   LO_TAX, LO_COMMITDATE,   LO_SHIPMODE')")

org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in stage 2.0 failed 4 times, most recent failure: Lost task 0.3 in stage 2.0 (TID 8, datanode03-bi-dev): java.lang.RuntimeException: Dictionary file lo_orderpriotity is locked for updation. Please try after some time
        at scala.sys.package$.error(package.scala:27)
        at org.apache.carbondata.spark.rdd.CarbonGlobalDictionaryGenerateRDD$$anon$1.<init>(CarbonGlobalDictionaryRDD.scala:353)
        at org.apache.carbondata.spark.rdd.CarbonGlobalDictionaryGenerateRDD.compute(CarbonGlobalDictionaryRDD.scala:293)
        at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:306)
        at org.apache.spark.rdd.RDD.iterator(RDD.scala:270)
        at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:66)
        at org.apache.spark.scheduler.Task.run(Task.scala:89)
        at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:214)
        at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1145)
        at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:615)
        at java.lang.Thread.run(Thread.java:745)

Driver stacktrace:
        at org.apache.spark.scheduler.DAGScheduler.org$apache$spark$scheduler$DAGScheduler$$failJobAndIndependentStages(DAGScheduler.scala:1431)
        at org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1419)
        at org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1418)
        at scala.collection.mutable.ResizableArray$class.foreach(ResizableArray.scala:59)
        at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:47)
        at org.apache.spark.scheduler.DAGScheduler.abortStage(DAGScheduler.scala:1418)
        at org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:799)
        at org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:799)
        at scala.Option.foreach(Option.scala:236)
        at org.apache.spark.scheduler.DAGScheduler.handleTaskSetFailed(DAGScheduler.scala:799)
        at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.doOnReceive(DAGScheduler.scala:1640)
        at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:1599)
        at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:1588)
        at org.apache.spark.util.EventLoop$$anon$1.run(EventLoop.scala:48)
        at org.apache.spark.scheduler.DAGScheduler.runJob(DAGScheduler.scala:620)
        at org.apache.spark.SparkContext.runJob(SparkContext.scala:1832)
        at org.apache.spark.SparkContext.runJob(SparkContext.scala:1845)
        at org.apache.spark.SparkContext.runJob(SparkContext.scala:1858)
        at org.apache.spark.SparkContext.runJob(SparkContext.scala:1929)
        at org.apache.spark.rdd.RDD$$anonfun$collect$1.apply(RDD.scala:927)
        at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:150)
        at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:111)
        at org.apache.spark.rdd.RDD.withScope(RDD.scala:316)
        at org.apache.spark.rdd.RDD.collect(RDD.scala:926)
        at org.apache.carbondata.spark.util.GlobalDictionaryUtil$.generateGlobalDictionary(GlobalDictionaryUtil.scala:800)
        at org.apache.spark.sql.execution.command.LoadTableUsingKettle.run(carbonTableSchema.scala:1197)
        at org.apache.spark.sql.execution.command.LoadTable.run(carbonTableSchema.scala:1036)
        at org.apache.spark.sql.execution.ExecutedCommand.sideEffectResult$lzycompute(commands.scala:58)
        at org.apache.spark.sql.execution.ExecutedCommand.sideEffectResult(commands.scala:56)
        at org.apache.spark.sql.execution.ExecutedCommand.doExecute(commands.scala:70)
        at org.apache.spark.sql.execution.SparkPlan$$anonfun$execute$5.apply(SparkPlan.scala:132)
        at org.apache.spark.sql.execution.SparkPlan$$anonfun$execute$5.apply(SparkPlan.scala:130)
        at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:150)
        at org.apache.spark.sql.execution.SparkPlan.execute(SparkPlan.scala:130)
        at org.apache.spark.sql.execution.QueryExecution.toRdd$lzycompute(QueryExecution.scala:55)
        at org.apache.spark.sql.execution.QueryExecution.toRdd(QueryExecution.scala:55)
        at org.apache.spark.sql.DataFrame.<init>(DataFrame.scala:145)
        at org.apache.spark.sql.DataFrame.<init>(DataFrame.scala:130)
        at org.apache.carbondata.spark.rdd.CarbonDataFrameRDD.<init>(CarbonDataFrameRDD.scala:23)
        at org.apache.spark.sql.CarbonContext.sql(CarbonContext.scala:137)
        at $line32.$read$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:37)
        at $line32.$read$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:42)
        at $line32.$read$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:44)
        at $line32.$read$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:46)
        at $line32.$read$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:48)
        at $line32.$read$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:50)
        at $line32.$read$$iwC$$iwC$$iwC$$iwC.<init>(<console>:52)
        at $line32.$read$$iwC$$iwC$$iwC.<init>(<console>:54)
        at $line32.$read$$iwC$$iwC.<init>(<console>:56)
        at $line32.$read$$iwC.<init>(<console>:58)
        at $line32.$read.<init>(<console>:60)
        at $line32.$read$.<init>(<console>:64)
        at $line32.$read$.<clinit>(<console>)
        at $line32.$eval$.<init>(<console>:7)
        at $line32.$eval$.<clinit>(<console>)
        at $line32.$eval.$print(<console>)
        at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
        at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
        at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
        at java.lang.reflect.Method.invoke(Method.java:606)
        at org.apache.spark.repl.SparkIMain$ReadEvalPrint.call(SparkIMain.scala:1065)
        at org.apache.spark.repl.SparkIMain$Request.loadAndRun(SparkIMain.scala:1346)
        at org.apache.spark.repl.SparkIMain.loadAndRunReq$1(SparkIMain.scala:840)
        at org.apache.spark.repl.SparkIMain.interpret(SparkIMain.scala:871)
        at org.apache.spark.repl.SparkIMain.interpret(SparkIMain.scala:819)
        at org.apache.spark.repl.SparkILoop.reallyInterpret$1(SparkILoop.scala:857)
        at org.apache.spark.repl.SparkILoop.interpretStartingWith(SparkILoop.scala:902)
        at org.apache.spark.repl.SparkILoop.command(SparkILoop.scala:814)
        at org.apache.spark.repl.SparkILoop.processLine$1(SparkILoop.scala:657)
        at org.apache.spark.repl.SparkILoop.innerLoop$1(SparkILoop.scala:665)
        at org.apache.spark.repl.SparkILoop.org$apache$spark$repl$SparkILoop$$loop(SparkILoop.scala:670)
        at org.apache.spark.repl.SparkILoop$$anonfun$org$apache$spark$repl$SparkILoop$$process$1.apply$mcZ$sp(SparkILoop.scala:997)
        at org.apache.spark.repl.SparkILoop$$anonfun$org$apache$spark$repl$SparkILoop$$process$1.apply(SparkILoop.scala:945)
        at org.apache.spark.repl.SparkILoop$$anonfun$org$apache$spark$repl$SparkILoop$$process$1.apply(SparkILoop.scala:945)
        at scala.tools.nsc.util.ScalaClassLoader$.savingContextLoader(ScalaClassLoader.scala:135)
        at org.apache.spark.repl.SparkILoop.org$apache$spark$repl$SparkILoop$$process(SparkILoop.scala:945)
        at org.apache.spark.repl.SparkILoop.process(SparkILoop.scala:1059)
        at org.apache.spark.repl.Main$.main(Main.scala:31)
        at org.apache.spark.repl.Main.main(Main.scala)
        at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
        at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
        at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
        at java.lang.reflect.Method.invoke(Method.java:606)
        at org.apache.spark.deploy.SparkSubmit$.org$apache$spark$deploy$SparkSubmit$$runMain(SparkSubmit.scala:731)
        at org.apache.spark.deploy.SparkSubmit$.doRunMain$1(SparkSubmit.scala:181)
        at org.apache.spark.deploy.SparkSubmit$.submit(SparkSubmit.scala:206)
        at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:121)
        at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)
Caused by: java.lang.RuntimeException: Dictionary file lo_orderpriotity is locked for updation. Please try after some time
        at scala.sys.package$.error(package.scala:27)